Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lire1P11260 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lire1P11260 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm24273-201ENSMUST00000102332 164 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm24469-201ENSMUST00000104487 131 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm8145-201ENSMUST00000118220 745 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm14352-201ENSMUST00000119250 449 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm13213-201ENSMUST00000119668 474 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm14875-201ENSMUST00000120881 319 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm14784-201ENSMUST00000121604 663 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm23782-201ENSMUST00000157939 120 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm24188-201ENSMUST00000157980 108 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm27387-201ENSMUST00000184583 116 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.49□□□□□ -1.69
Lire1P11260 Gm44371-201ENSMUST00000204148 467 ntBASIC4.49□□□□□ -1.69
Lire1P11260 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.49□□□□□ -1.69
Lire1P11260 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.49□□□□□ -1.69
Lire1P11260 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Gm22304-201ENSMUST00000082688 129 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 Synpr-207ENSMUST00000223583 3362 ntBASIC4.49□□□□□ -1.69
Lire1P11260 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lire1P11260 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lire1P11260 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 Gm12568-201ENSMUST00000117362 624 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm15388-201ENSMUST00000121578 726 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm14383-201ENSMUST00000121637 386 ntBASIC4.48□□□□□ -1.69
Lire1P11260 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 Gm25605-201ENSMUST00000158364 124 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm5929-201ENSMUST00000166883 487 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm17081-201ENSMUST00000167363 478 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm6647-201ENSMUST00000170514 641 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 Gm18828-202ENSMUST00000181035 310 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm27688-201ENSMUST00000183634 91 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm28267-201ENSMUST00000191093 265 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm36974-201ENSMUST00000194200 1071 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm34091-201ENSMUST00000200875 604 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Gm18507-201ENSMUST00000218855 525 ntBASIC4.48□□□□□ -1.69
Lire1P11260 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.48□□□□□ -1.69
Lire1P11260 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm26330-201ENSMUST00000082817 104 ntBASIC4.48□□□□□ -1.69
Lire1P11260 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms