Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm14621-201ENSMUST00000117709 689 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm14172-201ENSMUST00000118255 644 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm13478-201ENSMUST00000118312 413 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm9308-201ENSMUST00000119073 448 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm13508-201ENSMUST00000121639 775 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm11965-201ENSMUST00000122017 277 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm22613-201ENSMUST00000122679 292 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm25713-201ENSMUST00000158625 109 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm27834-201ENSMUST00000183427 125 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Mir6933-201ENSMUST00000184982 81 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm19503-201ENSMUST00000187109 241 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm29563-201ENSMUST00000187249 496 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm19786-201ENSMUST00000222589 580 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Chmp6P0C0A3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm25537-201ENSMUST00000103851 109 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm22269-201ENSMUST00000104002 130 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm12885-201ENSMUST00000122246 328 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm23228-201ENSMUST00000157296 270 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm5372-201ENSMUST00000187540 409 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm21742-201ENSMUST00000189352 548 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm38080-201ENSMUST00000194035 268 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm36985-201ENSMUST00000195595 379 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm44354-201ENSMUST00000196017 143 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm44521-201ENSMUST00000206469 217 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm45523-201ENSMUST00000210712 799 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Mir34b-201ENSMUST00000083558 84 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.35□□□□□ -1.71
Chmp6P0C0A3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm11673-201ENSMUST00000117846 331 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm11350-201ENSMUST00000121436 870 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm14473-201ENSMUST00000122269 557 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm22816-201ENSMUST00000157450 117 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm25999-201ENSMUST00000175398 133 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm28639-201ENSMUST00000191519 481 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm30280-201ENSMUST00000192214 262 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Trbv11-201ENSMUST00000194354 260 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm38334-201ENSMUST00000195060 313 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms