Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm16129-201ENSMUST00000152628 486 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm22859-201ENSMUST00000174978 122 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm37708-201ENSMUST00000192337 895 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm8745-201ENSMUST00000207846 782 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 AC153646.1-201ENSMUST00000223229 1279 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col3a1P08121 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col3a1P08121 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Col3a1P08121 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col3a1P08121 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Col3a1P08121 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.64
Col3a1P08121 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col3a1P08121 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col3a1P08121 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Mir676-201ENSMUST00000102443 89 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col3a1P08121 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Col3a1P08121 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm12564-201ENSMUST00000119860 321 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm25047-201ENSMUST00000122667 104 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.83□□□□□ -1.64
Col3a1P08121 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm18356-201ENSMUST00000185677 623 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm5268-201ENSMUST00000189212 940 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Gm44294-201ENSMUST00000205090 728 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Gm44615-201ENSMUST00000206548 358 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm45379-201ENSMUST00000211772 549 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 AC127302.1-201ENSMUST00000215973 1111 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col3a1P08121 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Col3a1P08121 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col3a1P08121 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col3a1P08121 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col3a1P08121 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.83□□□□□ -1.64
Col3a1P08121 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col3a1P08121 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Gm14975-201ENSMUST00000118741 664 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.82□□□□□ -1.64
Col3a1P08121 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Gm26320-201ENSMUST00000157742 306 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm24402-201ENSMUST00000157873 91 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm24314-201ENSMUST00000158274 123 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm10067-201ENSMUST00000179462 348 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.82□□□□□ -1.64
Col3a1P08121 Gm29576-201ENSMUST00000188020 678 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm28354-201ENSMUST00000190904 678 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm42983-201ENSMUST00000199879 815 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm18120-201ENSMUST00000220079 511 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.82□□□□□ -1.64
Col3a1P08121 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Gm10704-201ENSMUST00000098952 730 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.82□□□□□ -1.64
Col3a1P08121 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Col3a1P08121 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col3a1P08121 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col3a1P08121 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col3a1P08121 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col3a1P08121 Gm15783-201ENSMUST00000117521 633 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm15268-201ENSMUST00000118845 352 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms