Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Hmgb3O54879 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.15□□□□□ -1.9
Hmgb3O54879 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Hmgb3O54879 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Hmgb3O54879 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Hmgb3O54879 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm26367-201ENSMUST00000104165 132 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm11923-201ENSMUST00000118135 508 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm13831-201ENSMUST00000118764 302 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm12294-201ENSMUST00000119723 490 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm12808-201ENSMUST00000120597 404 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm13557-201ENSMUST00000120771 382 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm25908-201ENSMUST00000157624 98 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm13249-201ENSMUST00000177803 345 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm23215-201ENSMUST00000178153 121 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm13144-201ENSMUST00000179385 345 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm27387-201ENSMUST00000184583 116 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm18944-201ENSMUST00000207672 643 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.15□□□□□ -1.91
Hmgb3O54879 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.15□□□□□ -1.91
Hmgb3O54879 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Snora70-201ENSMUST00000083047 137 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Hmgb3O54879 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Hmgb3O54879 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.15□□□□□ -1.91
Hmgb3O54879 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm11878-201ENSMUST00000117908 400 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm15421-202ENSMUST00000118224 399 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm7618-201ENSMUST00000121643 171 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm12885-201ENSMUST00000122246 328 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm22453-201ENSMUST00000122801 318 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm24739-201ENSMUST00000158855 292 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Mir6715-201ENSMUST00000184990 57 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm18117-201ENSMUST00000187720 742 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm28872-201ENSMUST00000191518 158 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm18150-201ENSMUST00000195341 645 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm4248-201ENSMUST00000196905 316 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Mir6994-201ENSMUST00000198985 73 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm18789-201ENSMUST00000216115 550 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm19134-201ENSMUST00000221203 487 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.14□□□□□ -1.91
Hmgb3O54879 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hmgb3O54879 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hmgb3O54879 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm26273-201ENSMUST00000104180 131 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm13890-201ENSMUST00000117578 390 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm11698-201ENSMUST00000117948 455 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm11387-201ENSMUST00000120266 772 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm23499-201ENSMUST00000157736 268 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms