Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm22792-201ENSMUST00000157225 133 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm3454-201ENSMUST00000185571 412 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm28847-201ENSMUST00000186778 700 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm28923-201ENSMUST00000187755 322 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm5829-201ENSMUST00000191383 351 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm37164-201ENSMUST00000192809 637 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm38088-201ENSMUST00000195829 241 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm42990-201ENSMUST00000199231 312 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm44871-201ENSMUST00000207821 497 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr936-202ENSMUST00000216912 937 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm12582-201ENSMUST00000030555 697 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm25764-201ENSMUST00000104092 134 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm25833-201ENSMUST00000104137 133 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm11869-201ENSMUST00000118701 329 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm11746-201ENSMUST00000119843 821 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm22320-201ENSMUST00000157149 312 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm24998-201ENSMUST00000157908 89 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm5058-201ENSMUST00000187331 463 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm28196-201ENSMUST00000187719 640 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm2314-201ENSMUST00000200391 586 ntBASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Scn1aA2APX8 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm24987-201ENSMUST00000104453 134 ntBASIC3.91□□□□□ -1.78
Scn1aA2APX8 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm24664-201ENSMUST00000158939 100 ntBASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm28148-201ENSMUST00000186924 697 ntBASIC3.91□□□□□ -1.78
Scn1aA2APX8 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.91□□□□□ -1.78
Scn1aA2APX8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Scn1aA2APX8 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm23168-201ENSMUST00000157156 143 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm26746-201ENSMUST00000181722 487 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm19637-201ENSMUST00000185933 579 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm45006-201ENSMUST00000206078 690 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scn1aA2APX8 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm14659-201ENSMUST00000117667 843 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm15268-201ENSMUST00000118845 352 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm15275-201ENSMUST00000154752 347 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm16303-201ENSMUST00000161498 390 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm21999-201ENSMUST00000165985 387 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Trbv8-201ENSMUST00000194020 285 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm45157-201ENSMUST00000208729 401 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm34779-201ENSMUST00000210036 263 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.9□□□□□ -1.79
Scn1aA2APX8 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.9□□□□□ -1.79
Scn1aA2APX8 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Scn1aA2APX8 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scn1aA2APX8 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Gm13650-201ENSMUST00000117729 433 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms