Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm5252-201ENSMUST00000189030 909 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm29196-201ENSMUST00000189239 618 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm28924-201ENSMUST00000190012 241 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm43586-201ENSMUST00000195948 310 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm45031-201ENSMUST00000206800 288 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm18877-201ENSMUST00000207706 539 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim3Q9R1R2 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm23322-201ENSMUST00000104464 167 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm11408-201ENSMUST00000117889 519 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm15019-201ENSMUST00000120148 434 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm12087-201ENSMUST00000121878 258 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm25913-201ENSMUST00000157617 135 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm24854-201ENSMUST00000158025 98 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm24939-201ENSMUST00000158325 137 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28471-201ENSMUST00000185994 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28598-201ENSMUST00000186490 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm29268-201ENSMUST00000188669 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm29218-205ENSMUST00000190846 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28978-201ENSMUST00000191120 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm37172-201ENSMUST00000191926 615 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm4859-201ENSMUST00000199625 787 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm44543-201ENSMUST00000209136 396 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trim3Q9R1R2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4□□□□□ -1.77
Trim3Q9R1R2 Gm44847-201ENSMUST00000207104 1991 ntBASIC4□□□□□ -1.77
Trim3Q9R1R2 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4□□□□□ -1.77
Trim3Q9R1R2 Gm38212-201ENSMUST00000194081 2756 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms