Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm8666-201ENSMUST00000117517 292 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm11408-201ENSMUST00000117889 519 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm8244-201ENSMUST00000121254 264 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm23957-201ENSMUST00000157209 90 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm17155-201ENSMUST00000165969 473 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm23799-201ENSMUST00000175559 120 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm23215-201ENSMUST00000178153 121 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm27875-201ENSMUST00000184425 123 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm37501-201ENSMUST00000192830 691 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm44343-201ENSMUST00000196702 90 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm9245-201ENSMUST00000200528 983 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm44234-201ENSMUST00000204246 900 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lima1Q9ERG0 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm22272-201ENSMUST00000104039 134 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm22657-201ENSMUST00000104197 132 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm11719-201ENSMUST00000119399 351 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm12190-201ENSMUST00000120001 187 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm14716-201ENSMUST00000120138 718 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm12317-201ENSMUST00000122307 319 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm23789-201ENSMUST00000122536 301 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm25965-201ENSMUST00000157170 93 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm27864-201ENSMUST00000183704 190 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm29196-201ENSMUST00000189239 618 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm19131-201ENSMUST00000203408 789 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm4045-201ENSMUST00000204076 310 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm44773-201ENSMUST00000207374 557 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lima1Q9ERG0 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.88□□□□□ -1.79
Lima1Q9ERG0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm4736-201ENSMUST00000100870 380 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Snora64-201ENSMUST00000104521 134 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm14890-201ENSMUST00000117660 676 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm22988-201ENSMUST00000122759 144 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm12226-201ENSMUST00000144172 876 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm44972-201ENSMUST00000206419 406 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm44887-201ENSMUST00000208980 178 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm18387-201ENSMUST00000220333 702 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms