Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Cdc40Q9DC48 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm26019-201ENSMUST00000104407 119 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm15426-201ENSMUST00000117823 556 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm11385-201ENSMUST00000121513 570 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm14916-201ENSMUST00000121904 204 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm5924-201ENSMUST00000132554 871 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm24961-201ENSMUST00000157918 184 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm17109-201ENSMUST00000163985 358 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm26219-201ENSMUST00000175216 71 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm27254-201ENSMUST00000183926 517 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm19280-201ENSMUST00000190191 205 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm28724-202ENSMUST00000194218 295 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm37490-201ENSMUST00000195566 724 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm3189-201ENSMUST00000205595 832 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm18016-201ENSMUST00000216119 801 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdc40Q9DC48 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm15076-201ENSMUST00000117076 474 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm15148-201ENSMUST00000117602 156 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm11262-201ENSMUST00000119326 833 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm22204-201ENSMUST00000122654 327 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Snora81-201ENSMUST00000157310 178 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm25606-201ENSMUST00000158363 95 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Mir6907-201ENSMUST00000183764 71 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm27899-201ENSMUST00000184715 64 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm29634-201ENSMUST00000188467 696 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm28699-201ENSMUST00000189193 696 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm28190-201ENSMUST00000189766 722 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm43440-201ENSMUST00000201957 729 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm45474-201ENSMUST00000209471 408 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdc40Q9DC48 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.87□□□□□ -1.79
Cdc40Q9DC48 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm24608-201ENSMUST00000104381 136 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm6754-201ENSMUST00000117124 913 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm12757-201ENSMUST00000119465 800 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm14586-201ENSMUST00000119571 408 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm14656-201ENSMUST00000120342 502 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm15926-201ENSMUST00000120492 550 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms