Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.44□□□□□ -1.7
Cstf3Q99LI7 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm12285-201ENSMUST00000117347 233 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm14861-201ENSMUST00000119451 455 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm12379-201ENSMUST00000119607 391 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm13902-201ENSMUST00000120168 605 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm5391-201ENSMUST00000121155 613 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm15116-201ENSMUST00000122248 663 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm16318-201ENSMUST00000162402 601 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Mir5106-201ENSMUST00000174936 73 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm28190-201ENSMUST00000189766 722 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm44376-201ENSMUST00000197570 128 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm32308-201ENSMUST00000203053 280 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm4714-201ENSMUST00000203395 279 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm44058-201ENSMUST00000204335 467 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm4052-201ENSMUST00000220890 451 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Mir30b-201ENSMUST00000083542 96 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm7676-201ENSMUST00000084055 319 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Mir504-201ENSMUST00000093602 79 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Cstf3Q99LI7 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm23431-201ENSMUST00000104006 107 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm11898-201ENSMUST00000117161 385 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm15297-201ENSMUST00000117795 290 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm14933-201ENSMUST00000118840 481 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm9001-201ENSMUST00000121642 399 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm25806-201ENSMUST00000122782 122 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm22378-201ENSMUST00000157481 111 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm24751-201ENSMUST00000157844 102 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm23546-201ENSMUST00000158211 137 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Scarna6-201ENSMUST00000158656 265 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm43304-201ENSMUST00000196803 326 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm8069-201ENSMUST00000197887 154 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cstf3Q99LI7 Gm18850-201ENSMUST00000211578 388 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC102352.1-201ENSMUST00000224187 582 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.42□□□□□ -1.7
Cstf3Q99LI7 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms