Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm31931-201ENSMUST00000219666 222 ntBASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.13□□□□□ -1.91
Nup35Q8R4R6 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 BC023105-201ENSMUST00000073997 1227 ntBASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Nup35Q8R4R6 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm13268-201ENSMUST00000117485 433 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm13650-201ENSMUST00000117729 433 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm16128-201ENSMUST00000117855 626 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm9078-201ENSMUST00000119126 617 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm6373-201ENSMUST00000121026 360 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm5123-201ENSMUST00000121905 837 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm25177-201ENSMUST00000122634 117 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm5755-201ENSMUST00000152394 837 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm27849-201ENSMUST00000183673 125 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm27445-201ENSMUST00000184484 72 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm37293-201ENSMUST00000191658 295 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm18850-201ENSMUST00000211578 388 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm45727-201ENSMUST00000212886 572 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC114573.1-201ENSMUST00000224120 1210 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Nup35Q8R4R6 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Snord65-201ENSMUST00000104269 72 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm9427-201ENSMUST00000116187 651 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm11830-201ENSMUST00000120175 561 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm13489-201ENSMUST00000121234 971 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm26476-201ENSMUST00000122618 313 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm3757-201ENSMUST00000125878 675 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm12226-201ENSMUST00000144172 876 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Mir7653-201ENSMUST00000184358 61 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm37111-201ENSMUST00000193250 634 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm37167-201ENSMUST00000194946 396 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm36954-201ENSMUST00000195362 363 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm6051-201ENSMUST00000201529 352 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm44869-201ENSMUST00000208836 357 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Gm24919-201ENSMUST00000083020 106 ntBASIC3.11□□□□□ -1.91
Nup35Q8R4R6 Mir370-201ENSMUST00000083499 79 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms