Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm7269-201ENSMUST00000210819 1373 ntBASIC4□□□□□ -1.77
Ccdc28aQ8CEI3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc28aQ8CEI3 Gm43871-201ENSMUST00000204931 1955 ntBASIC4□□□□□ -1.77
Ccdc28aQ8CEI3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc28aQ8CEI3 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm13333-201ENSMUST00000119424 781 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm12287-201ENSMUST00000119770 707 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm16471-201ENSMUST00000121940 618 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Scarna6-201ENSMUST00000158656 265 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm24739-201ENSMUST00000158855 292 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm8823-201ENSMUST00000193158 433 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm42453-201ENSMUST00000200477 409 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm44869-201ENSMUST00000208836 357 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm5917-201ENSMUST00000217638 721 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc28aQ8CEI3 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm23133-201ENSMUST00000104255 135 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm13650-201ENSMUST00000117729 433 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm25966-201ENSMUST00000157169 117 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm24550-201ENSMUST00000158648 279 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm27445-201ENSMUST00000184484 72 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm2950-201ENSMUST00000185530 520 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm37996-201ENSMUST00000191859 367 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm44003-201ENSMUST00000203024 490 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm45162-201ENSMUST00000209013 618 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm18194-201ENSMUST00000210455 481 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Gm45710-201ENSMUST00000212847 215 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28aQ8CEI3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm11718-201ENSMUST00000119942 537 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm24850-201ENSMUST00000158029 119 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm22529-201ENSMUST00000158817 123 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm27695-201ENSMUST00000184301 91 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm3496-201ENSMUST00000188283 745 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm29479-201ENSMUST00000190352 455 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm43853-201ENSMUST00000197162 301 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm45228-201ENSMUST00000206585 352 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm29774-201ENSMUST00000219270 436 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm24626-201ENSMUST00000082621 161 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.97□□□□□ -1.77
Ccdc28aQ8CEI3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc28aQ8CEI3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc28aQ8CEI3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc28aQ8CEI3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28aQ8CEI3 Mir147-201ENSMUST00000102354 79 ntBASIC3.96□□□□□ -1.78
Ccdc28aQ8CEI3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms