Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Mir147-201ENSMUST00000102354 79 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25096-201ENSMUST00000104043 129 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm15297-201ENSMUST00000117795 290 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm14885-201ENSMUST00000117969 496 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm12392-201ENSMUST00000118014 938 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm16383-201ENSMUST00000118122 232 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm13687-201ENSMUST00000119857 282 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm5401-201ENSMUST00000122444 365 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29332-201ENSMUST00000190829 227 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm36964-201ENSMUST00000191876 198 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm21006-201ENSMUST00000196930 667 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm31520-201ENSMUST00000203048 733 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44002-201ENSMUST00000205134 594 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm45551-201ENSMUST00000211459 928 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc28bQ8CEG5 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25647-201ENSMUST00000101832 78 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25823-201ENSMUST00000101995 78 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm14786-201ENSMUST00000117127 944 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11673-201ENSMUST00000117846 331 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm16471-201ENSMUST00000121940 618 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25102-201ENSMUST00000122479 112 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25557-201ENSMUST00000158084 315 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm23225-201ENSMUST00000158121 114 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm24220-201ENSMUST00000177753 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25988-201ENSMUST00000177759 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm23471-201ENSMUST00000177886 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm22392-201ENSMUST00000177971 107 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm26488-201ENSMUST00000178225 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm23449-201ENSMUST00000179208 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25221-201ENSMUST00000180051 79 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm27636-201ENSMUST00000184528 122 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28688-201ENSMUST00000187301 268 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm37213-201ENSMUST00000193077 586 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm38080-201ENSMUST00000194035 268 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm18036-201ENSMUST00000195256 272 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44138-201ENSMUST00000204939 271 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm17911-201ENSMUST00000210806 877 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc28bQ8CEG5 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms