Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm29159-201ENSMUST00000187969 379 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm28654-201ENSMUST00000189801 379 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm42708-201ENSMUST00000196332 905 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm44075-201ENSMUST00000204208 216 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm44609-201ENSMUST00000207157 460 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45730-201ENSMUST00000212560 395 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC164161.1-201ENSMUST00000214076 639 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC133156.1-202ENSMUST00000227284 363 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Mir412-201ENSMUST00000083636 80 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm22231-201ENSMUST00000101027 73 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm26289-201ENSMUST00000104169 131 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13193-201ENSMUST00000117275 225 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm24780-201ENSMUST00000157635 143 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm25904-201ENSMUST00000158491 143 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23179-201ENSMUST00000158693 304 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm17086-201ENSMUST00000171346 484 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm24100-201ENSMUST00000178592 79 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm24137-201ENSMUST00000180055 79 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm22391-201ENSMUST00000180356 79 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC099578.1-201ENSMUST00000220147 435 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm46369-201ENSMUST00000221577 401 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC122341.1-201ENSMUST00000227291 560 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC112935.1-201ENSMUST00000227603 250 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23848-201ENSMUST00000083826 106 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.15□□□□□ -1.42
Pcdhb7Q8CDY9 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Gm37999-201ENSMUST00000195178 1809 ntBASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Pcdhb7Q8CDY9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdhb7Q8CDY9 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms