Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trub1Q8C0D0 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.95□□□□□ -1.78
Trub1Q8C0D0 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm11923-201ENSMUST00000118135 508 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm15885-201ENSMUST00000122114 388 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm23228-201ENSMUST00000157296 270 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm22889-201ENSMUST00000158639 58 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm24550-201ENSMUST00000158648 279 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm17421-201ENSMUST00000167845 674 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm8296-201ENSMUST00000185597 524 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm17951-201ENSMUST00000198536 496 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm43155-201ENSMUST00000202661 494 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm45735-201ENSMUST00000212779 319 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm45789-201ENSMUST00000213038 364 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Gm24626-201ENSMUST00000082621 161 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trub1Q8C0D0 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.94□□□□□ -1.78
Trub1Q8C0D0 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm23697-201ENSMUST00000103897 110 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm23273-201ENSMUST00000104058 135 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm13170-201ENSMUST00000119716 643 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm25106-201ENSMUST00000122672 134 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm23960-201ENSMUST00000157206 131 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm22816-201ENSMUST00000157450 117 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm22120-201ENSMUST00000175590 70 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm28471-201ENSMUST00000185994 615 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm43825-201ENSMUST00000199650 734 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm45690-201ENSMUST00000210775 246 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm46369-201ENSMUST00000221577 401 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trub1Q8C0D0 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm25765-201ENSMUST00000104100 132 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm12467-201ENSMUST00000117625 745 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm13755-201ENSMUST00000118509 305 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm11510-201ENSMUST00000120278 347 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm20693-201ENSMUST00000177431 211 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm28094-201ENSMUST00000185262 390 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm2142-201ENSMUST00000197899 589 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm3829-201ENSMUST00000222362 619 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm23623-201ENSMUST00000082461 107 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.92□□□□□ -1.78
Trub1Q8C0D0 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trub1Q8C0D0 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.91□□□□□ -1.78
Trub1Q8C0D0 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trub1Q8C0D0 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trub1Q8C0D0 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.91□□□□□ -1.78
Trub1Q8C0D0 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trub1Q8C0D0 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms