Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trerf1Q8BXJ2 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trerf1Q8BXJ2 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trerf1Q8BXJ2 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trerf1Q8BXJ2 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trerf1Q8BXJ2 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm15785-201ENSMUST00000119145 694 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm25603-201ENSMUST00000158361 105 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm24551-201ENSMUST00000158645 92 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm4222-201ENSMUST00000165784 470 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm26914-201ENSMUST00000182262 223 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm19427-201ENSMUST00000183619 208 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm42438-201ENSMUST00000197832 974 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm43144-201ENSMUST00000198256 485 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm43418-201ENSMUST00000201334 428 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm23452-201ENSMUST00000083327 107 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm25582-201ENSMUST00000083412 110 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trerf1Q8BXJ2 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm24578-201ENSMUST00000103970 129 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm24160-201ENSMUST00000104594 126 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm14007-201ENSMUST00000118288 210 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm13009-201ENSMUST00000121307 267 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm24371-201ENSMUST00000122662 267 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm26153-201ENSMUST00000157433 127 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm16558-201ENSMUST00000163015 532 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm5777-201ENSMUST00000177265 448 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm26365-201ENSMUST00000179177 94 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm28097-201ENSMUST00000187333 366 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm28356-202ENSMUST00000187566 858 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Supt4b-201ENSMUST00000214434 351 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Gm7822-201ENSMUST00000222433 581 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.04□□□□□ -1.6
Trerf1Q8BXJ2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms