Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm38201-201ENSMUST00000192143 387 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm17829-201ENSMUST00000219782 344 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim58Q5NCC9 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm23697-201ENSMUST00000103897 110 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm23481-201ENSMUST00000104173 131 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm13567-201ENSMUST00000118026 247 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm11746-201ENSMUST00000119843 821 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm9003-201ENSMUST00000121810 482 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm15075-201ENSMUST00000122187 477 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Trbv11-201ENSMUST00000194354 260 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm44099-201ENSMUST00000203299 112 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.88□□□□□ -1.63
Trim58Q5NCC9 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Mir551b-201ENSMUST00000102165 98 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm15180-201ENSMUST00000117745 492 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm11923-201ENSMUST00000118135 508 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm14605-201ENSMUST00000120599 268 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm23441-201ENSMUST00000157268 127 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm26148-201ENSMUST00000157430 68 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm24503-201ENSMUST00000158454 135 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm7281-201ENSMUST00000160010 543 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm16285-201ENSMUST00000162999 347 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Mir6960-201ENSMUST00000183449 61 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm28094-201ENSMUST00000185262 390 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm5372-201ENSMUST00000187540 409 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm43155-201ENSMUST00000202661 494 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm45162-201ENSMUST00000209013 618 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm17989-201ENSMUST00000211543 412 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm45727-201ENSMUST00000212886 572 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Gm26449-201ENSMUST00000082452 104 ntBASIC4.87□□□□□ -1.63
Trim58Q5NCC9 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms