Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24960-201ENSMUST00000157923 90 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm36986-201ENSMUST00000195320 353 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm45007-201ENSMUST00000206237 366 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm9373-201ENSMUST00000208724 599 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm6841-201ENSMUST00000220602 598 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.01□□□□□ -1.77
Trim40Q3UWA4 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm15426-201ENSMUST00000117823 556 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm5060-201ENSMUST00000120072 599 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm11398-201ENSMUST00000120330 320 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm23959-201ENSMUST00000157208 324 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm23205-201ENSMUST00000158671 103 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm22243-201ENSMUST00000178754 120 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm29332-201ENSMUST00000190829 227 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm38234-201ENSMUST00000195204 421 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Trav3-2-201ENSMUST00000198999 305 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm5885-202ENSMUST00000203357 528 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm43919-201ENSMUST00000204303 364 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 AC159472.1-201ENSMUST00000218178 463 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 AC125543.1-201ENSMUST00000222778 101 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm7093-201ENSMUST00000223004 581 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 AC154738.5-201ENSMUST00000227397 310 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm23626-201ENSMUST00000082458 133 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim40Q3UWA4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4□□□□□ -1.77
Trim40Q3UWA4 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim40Q3UWA4 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm25313-201ENSMUST00000101817 116 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm22370-201ENSMUST00000102422 83 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm11432-201ENSMUST00000117334 231 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm12788-201ENSMUST00000119090 308 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm14175-201ENSMUST00000119835 241 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm23819-201ENSMUST00000158744 109 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm16303-201ENSMUST00000161498 390 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm9890-201ENSMUST00000171867 537 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm23287-201ENSMUST00000179427 116 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm23143-201ENSMUST00000180137 116 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm27025-201ENSMUST00000182392 942 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Mir6938-201ENSMUST00000184173 63 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm19503-201ENSMUST00000187109 241 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm29563-201ENSMUST00000187249 496 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm33571-201ENSMUST00000193271 657 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms