Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm23709-201ENSMUST00000104364 130 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Lipe-203ENSMUST00000105177 1251 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm12285-201ENSMUST00000117347 233 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm13379-201ENSMUST00000118053 621 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm13785-201ENSMUST00000119099 690 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm15387-201ENSMUST00000120421 648 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm24628-201ENSMUST00000122761 289 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Mir6411-201ENSMUST00000183556 108 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm29484-201ENSMUST00000186067 324 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm8498-201ENSMUST00000188227 974 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm28190-201ENSMUST00000189766 722 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm37164-201ENSMUST00000192809 637 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm43494-201ENSMUST00000197672 388 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 AL929265.1-201ENSMUST00000213427 125 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm25699-201ENSMUST00000082896 167 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm23456-201ENSMUST00000083335 137 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm5518-201ENSMUST00000084171 648 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.35□□□□□ -1.71
Brf2Q3UAW9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm14365-201ENSMUST00000117535 587 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm14795-201ENSMUST00000118461 471 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm14926-201ENSMUST00000120650 508 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm5391-201ENSMUST00000121155 613 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm11909-201ENSMUST00000121424 759 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm14695-201ENSMUST00000121721 282 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm13232-201ENSMUST00000121816 632 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm15838-201ENSMUST00000161575 180 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm16134-201ENSMUST00000161714 336 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm27538-201ENSMUST00000185065 294 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm29031-201ENSMUST00000185316 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm29000-201ENSMUST00000185444 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm28204-201ENSMUST00000185934 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm28290-201ENSMUST00000186505 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm28161-201ENSMUST00000186669 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm28749-209ENSMUST00000189599 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm29332-201ENSMUST00000190829 227 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm37881-201ENSMUST00000193001 421 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm33163-201ENSMUST00000194504 614 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm8069-201ENSMUST00000197887 154 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm44058-201ENSMUST00000204335 467 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm7726-201ENSMUST00000206241 231 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm18268-201ENSMUST00000208445 943 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm45690-201ENSMUST00000210775 246 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.34□□□□□ -1.71
Brf2Q3UAW9 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms