Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm25430-201ENSMUST00000157614 289 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm25909-201ENSMUST00000157619 121 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm24853-201ENSMUST00000158026 121 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm23115-201ENSMUST00000158480 108 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm22076-201ENSMUST00000158601 84 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm3170-201ENSMUST00000168753 850 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm17907-201ENSMUST00000173150 710 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm3348-201ENSMUST00000177813 850 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm22420-201ENSMUST00000178795 126 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Mir7006-201ENSMUST00000183624 69 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Mir6417-201ENSMUST00000183815 116 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Mir6412-201ENSMUST00000184477 97 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm27636-201ENSMUST00000184528 122 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm28353-201ENSMUST00000186482 570 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm28533-201ENSMUST00000186741 570 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm18036-201ENSMUST00000195256 272 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm44465-201ENSMUST00000199536 114 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm44266-201ENSMUST00000205235 500 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm33601-201ENSMUST00000210001 961 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm45249-201ENSMUST00000211021 348 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm12582-201ENSMUST00000030555 697 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Mir188-201ENSMUST00000083464 68 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.12□□□□□ -1.75
Cdx4Q07424 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx4Q07424 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx4Q07424 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx4Q07424 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx4Q07424 Mir467h-201ENSMUST00000116759 121 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Mir669g-201ENSMUST00000116809 123 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm12878-201ENSMUST00000118744 332 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm14784-201ENSMUST00000121604 663 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm11804-201ENSMUST00000121663 468 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm11759-201ENSMUST00000121742 464 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm22916-201ENSMUST00000157616 119 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm25846-201ENSMUST00000158013 135 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm26172-201ENSMUST00000158421 134 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm3216-201ENSMUST00000166927 486 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm3141-201ENSMUST00000168726 499 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm22166-201ENSMUST00000178419 121 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm23288-201ENSMUST00000179213 121 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm27313-201ENSMUST00000183500 142 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Mir496b-201ENSMUST00000184935 113 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm27148-201ENSMUST00000185086 160 ntBASIC4.11□□□□□ -1.75
Cdx4Q07424 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms