Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col8a1Q00780 Fam35a-206ENSMUST00000228626 3100 ntBASIC4.79□□□□□ -1.64
Col8a1Q00780 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col8a1Q00780 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Col8a1Q00780 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm24117-201ENSMUST00000103973 133 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm11408-201ENSMUST00000117889 519 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm11826-201ENSMUST00000118781 438 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm14901-201ENSMUST00000119001 283 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm14835-201ENSMUST00000119039 315 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm14046-201ENSMUST00000119389 509 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm15034-201ENSMUST00000120043 349 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm14998-201ENSMUST00000120502 495 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm22236-201ENSMUST00000157093 106 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm24550-201ENSMUST00000158648 279 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm22951-201ENSMUST00000179471 107 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm29124-201ENSMUST00000186576 452 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Col8a1Q00780 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm43494-201ENSMUST00000197672 388 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.78□□□□□ -1.64
Col8a1Q00780 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm43039-201ENSMUST00000202883 963 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm34224-201ENSMUST00000204606 364 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm44539-201ENSMUST00000206010 238 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm45156-201ENSMUST00000207255 439 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm45727-201ENSMUST00000212886 572 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm23795-201ENSMUST00000084006 137 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col8a1Q00780 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col8a1Q00780 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.78□□□□□ -1.64
Col8a1Q00780 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Col8a1Q00780 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm37894-201ENSMUST00000195416 2599 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm23879-201ENSMUST00000116874 126 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm13311-201ENSMUST00000117863 379 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm15333-201ENSMUST00000118825 364 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm2768-201ENSMUST00000121062 250 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm12095-201ENSMUST00000121962 816 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm23211-201ENSMUST00000122717 308 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Mir1947-201ENSMUST00000158235 85 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm24561-201ENSMUST00000175182 95 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms