Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PrkdcP97313 Gm25290-201ENSMUST00000122796 144 ntBASIC2.62□□□□□ -1.99
PrkdcP97313 Gm22910-201ENSMUST00000178568 132 ntBASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PrkdcP97313 AC154441.1-201ENSMUST00000223653 1006 ntBASIC2.62□□□□□ -1.99
PrkdcP97313 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
PrkdcP97313 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Gm45378-201ENSMUST00000211063 2711 ntBASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
PrkdcP97313 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PrkdcP97313 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PrkdcP97313 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PrkdcP97313 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PrkdcP97313 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm24780-201ENSMUST00000157635 143 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm24014-201ENSMUST00000157728 157 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm32340-201ENSMUST00000192883 259 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm18900-201ENSMUST00000193218 584 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.61□□□□□ -1.99
PrkdcP97313 AC159622.1-201ENSMUST00000221004 554 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm25821-201ENSMUST00000093657 133 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm37244-201ENSMUST00000191748 1981 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm20276-201ENSMUST00000216122 2648 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm43594-201ENSMUST00000201153 3442 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm43015-201ENSMUST00000199087 565 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm7948-201ENSMUST00000212607 844 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm25134-201ENSMUST00000082646 160 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm37776-201ENSMUST00000193471 2497 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm37781-201ENSMUST00000194773 3218 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PrkdcP97313 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PrkdcP97313 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm12005-201ENSMUST00000121451 379 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm6625-201ENSMUST00000177870 272 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm23402-201ENSMUST00000178130 107 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm6510-201ENSMUST00000195916 574 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm18482-201ENSMUST00000202405 760 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm18011-201ENSMUST00000203717 565 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm18225-201ENSMUST00000216708 742 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PrkdcP97313 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm8129-201ENSMUST00000118230 213 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm15141-201ENSMUST00000121860 729 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm8242-202ENSMUST00000193056 475 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Gm7540-201ENSMUST00000219764 926 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.61□□□□□ -1.99
PrkdcP97313 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PrkdcP97313 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Malat1-201ENSMUST00000172812 6983 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm15493-201ENSMUST00000119461 528 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm12226-201ENSMUST00000144172 876 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 AL672194.1-201ENSMUST00000224841 603 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms