Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm12358-201ENSMUST00000121842 520 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm13214-201ENSMUST00000122137 408 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm22755-201ENSMUST00000157143 100 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm25846-201ENSMUST00000158013 135 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.26□□□□□ -1.57
Shmt1P50431 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm27266-201ENSMUST00000184521 123 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Mir7028-201ENSMUST00000185016 64 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Shmt1P50431 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm38329-201ENSMUST00000193473 427 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm38041-201ENSMUST00000194445 661 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm43276-201ENSMUST00000199712 364 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm7495-201ENSMUST00000215099 426 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm21286-201ENSMUST00000098035 545 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Shmt1P50431 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm13087-201ENSMUST00000118298 256 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm23069-201ENSMUST00000158240 311 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm23824-201ENSMUST00000158741 276 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Shmt1P50431 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm17081-201ENSMUST00000167363 478 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm19203-201ENSMUST00000174049 939 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm10292-202ENSMUST00000193165 585 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm37404-201ENSMUST00000195726 359 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm43238-201ENSMUST00000196463 359 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm44990-201ENSMUST00000203922 217 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm44259-201ENSMUST00000204996 298 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm29809-201ENSMUST00000218423 493 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.25□□□□□ -1.57
Shmt1P50431 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.25□□□□□ -1.57
Shmt1P50431 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.25□□□□□ -1.57
Shmt1P50431 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Shmt1P50431 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.24□□□□□ -1.57
Shmt1P50431 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Shmt1P50431 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Shmt1P50431 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Shmt1P50431 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm6429-201ENSMUST00000117144 475 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm8145-201ENSMUST00000118220 745 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm11869-201ENSMUST00000118701 329 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm15452-201ENSMUST00000119877 240 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Defa-ps13-201ENSMUST00000120695 204 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm13149-201ENSMUST00000122071 339 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm5353-201ENSMUST00000139800 793 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.24□□□□□ -1.57
Shmt1P50431 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm26173-201ENSMUST00000158416 136 ntBASIC5.24□□□□□ -1.57
Shmt1P50431 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.24□□□□□ -1.57
Shmt1P50431 Gm3531-201ENSMUST00000162698 489 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms