Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm44027-201ENSMUST00000203419 3480 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm14815-201ENSMUST00000120060 488 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm4660-201ENSMUST00000131499 403 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm26346-201ENSMUST00000157525 329 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm25365-201ENSMUST00000158852 121 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm18343-201ENSMUST00000172802 604 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm29519-201ENSMUST00000186994 398 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm3351-201ENSMUST00000193454 505 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm37177-201ENSMUST00000193768 417 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.46□□□□□ -1.38
Rfx1P48377 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm44818-201ENSMUST00000206608 358 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm17890-201ENSMUST00000221419 757 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm35558-203ENSMUST00000222264 204 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC154623.1-201ENSMUST00000224348 805 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC122448.1-201ENSMUST00000226317 772 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Rfx1P48377 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Rfx1P48377 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rfx1P48377 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.46□□□□□ -1.38
Rfx1P48377 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Mir700-201ENSMUST00000102169 79 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm13835-201ENSMUST00000118459 685 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm14874-201ENSMUST00000118995 438 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm5287-201ENSMUST00000120666 598 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm13220-201ENSMUST00000121535 508 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm9597-201ENSMUST00000171913 602 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm27855-201ENSMUST00000184122 128 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm29045-201ENSMUST00000187278 698 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm28785-201ENSMUST00000187478 379 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm43472-201ENSMUST00000200175 154 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm43919-201ENSMUST00000204303 364 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm45023-201ENSMUST00000207951 379 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm38574-201ENSMUST00000211855 640 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Rfx1P48377 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Gm9845-201ENSMUST00000056409 598 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Rfx1P48377 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rfx1P48377 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Gm38104-201ENSMUST00000195121 1895 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.45□□□□□ -1.38
Rfx1P48377 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.45□□□□□ -1.38
Rfx1P48377 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Rfx1P48377 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms