Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm45162-201ENSMUST00000209013 618 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.82□□□□□ -1.8
Cdx2P43241 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm15988-201ENSMUST00000118677 367 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm15361-201ENSMUST00000119320 444 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm14687-201ENSMUST00000120206 363 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm12900-201ENSMUST00000120919 573 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm15275-201ENSMUST00000154752 347 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm22531-201ENSMUST00000158819 140 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm16134-201ENSMUST00000161714 336 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm17155-201ENSMUST00000165969 473 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdx2P43241 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm28614-201ENSMUST00000186483 458 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm45157-201ENSMUST00000208729 401 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm8748-201ENSMUST00000211125 587 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm7119-201ENSMUST00000221345 695 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm3829-201ENSMUST00000222362 619 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Gm24147-201ENSMUST00000082763 144 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdx2P43241 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx2P43241 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.81□□□□□ -1.8
Cdx2P43241 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx2P43241 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx2P43241 Mir466i-201ENSMUST00000116924 121 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm23168-201ENSMUST00000157156 143 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm4222-201ENSMUST00000165784 470 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm27189-201ENSMUST00000184119 190 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm17954-201ENSMUST00000195893 607 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx2P43241 Gm44431-201ENSMUST00000203500 413 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm45245-201ENSMUST00000210082 376 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.8□□□□□ -1.8
Cdx2P43241 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.8□□□□□ -1.8
Cdx2P43241 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx2P43241 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx2P43241 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx2P43241 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdx2P43241 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdx2P43241 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm24318-201ENSMUST00000104490 131 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx2P43241 Gm14739-201ENSMUST00000120424 802 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm13440-201ENSMUST00000121665 496 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm26320-201ENSMUST00000157742 306 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm2862-201ENSMUST00000161524 328 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Cdx2P43241 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdx2P43241 Gm19503-201ENSMUST00000187109 241 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx2P43241 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.79□□□□□ -1.8
Cdx2P43241 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms