Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm2691-201ENSMUST00000203205 901 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm45367-201ENSMUST00000210171 347 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm36247-201ENSMUST00000211834 285 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm17779-201ENSMUST00000213395 394 ntBASIC5.06□□□□□ -1.6
Traf1P39428 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.06□□□□□ -1.6
Traf1P39428 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Traf1P39428 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Traf1P39428 Mir346-201ENSMUST00000083547 98 ntBASIC5.06□□□□□ -1.6
Traf1P39428 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Traf1P39428 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Traf1P39428 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.06□□□□□ -1.6
Traf1P39428 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.06□□□□□ -1.6
Traf1P39428 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm15426-201ENSMUST00000117823 556 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.05□□□□□ -1.6
Traf1P39428 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Traf1P39428 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Traf1P39428 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Traf1P39428 Gm22859-201ENSMUST00000174978 122 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm27025-201ENSMUST00000182392 942 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Gm28830-201ENSMUST00000188192 213 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm9541-201ENSMUST00000188409 502 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm38080-201ENSMUST00000194035 268 ntBASIC5.05□□□□□ -1.6
Traf1P39428 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.05□□□□□ -1.6
Traf1P39428 Gm4045-201ENSMUST00000204076 310 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Traf1P39428 Gm17987-201ENSMUST00000206902 603 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm44656-201ENSMUST00000208428 490 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Gm19269-201ENSMUST00000211401 804 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Traf1P39428 Snord14e-201ENSMUST00000082857 90 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.05□□□□□ -1.6
Traf1P39428 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
Traf1P39428 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Traf1P39428 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Traf1P39428 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.04□□□□□ -1.6
Traf1P39428 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Traf1P39428 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Traf1P39428 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Traf1P39428 Gm14107-201ENSMUST00000117774 330 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm14771-201ENSMUST00000118249 203 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm3835-201ENSMUST00000120752 403 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.04□□□□□ -1.6
Traf1P39428 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Traf1P39428 Gm24965-201ENSMUST00000157922 106 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.04□□□□□ -1.6
Traf1P39428 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.04□□□□□ -1.6
Traf1P39428 Gm37219-201ENSMUST00000192036 926 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm42830-201ENSMUST00000196642 313 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm44585-201ENSMUST00000207150 607 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm18039-201ENSMUST00000217816 728 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
Traf1P39428 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.04□□□□□ -1.6
Traf1P39428 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm6863-201ENSMUST00000052882 636 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm7204-201ENSMUST00000062591 600 ntBASIC5.04□□□□□ -1.6
Traf1P39428 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Traf1P39428 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Traf1P39428 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Traf1P39428 Gm23928-201ENSMUST00000082469 145 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Snord21-201ENSMUST00000082519 94 ntBASIC5.04□□□□□ -1.6
Traf1P39428 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Gm26064-201ENSMUST00000083381 109 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.04□□□□□ -1.6
Traf1P39428 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Traf1P39428 Gm43658-201ENSMUST00000202348 4176 ntBASIC5.04□□□□□ -1.6
Traf1P39428 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm45093-201ENSMUST00000206859 2463 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Traf1P39428 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Traf1P39428 Gm23424-201ENSMUST00000103889 110 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm12571-201ENSMUST00000118132 243 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms