Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm14982-201ENSMUST00000121102 442 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm23837-201ENSMUST00000122656 286 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LdlrP35951 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.04□□□□□ -1.6
LdlrP35951 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.04□□□□□ -1.6
LdlrP35951 Gm22841-201ENSMUST00000158443 62 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm26468-201ENSMUST00000158644 106 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.04□□□□□ -1.6
LdlrP35951 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LdlrP35951 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.04□□□□□ -1.6
LdlrP35951 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LdlrP35951 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.04□□□□□ -1.6
LdlrP35951 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm2147-201ENSMUST00000193588 639 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm36953-201ENSMUST00000195295 268 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm3189-201ENSMUST00000205595 832 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm45189-201ENSMUST00000208567 363 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LdlrP35951 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LdlrP35951 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.04□□□□□ -1.6
LdlrP35951 AV026068-237ENSMUST00000226075 572 ntBASIC5.04□□□□□ -1.6
LdlrP35951 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.04□□□□□ -1.6
LdlrP35951 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LdlrP35951 Gm25260-201ENSMUST00000083053 134 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Gm21286-201ENSMUST00000098035 545 ntBASIC5.04□□□□□ -1.6
LdlrP35951 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LdlrP35951 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LdlrP35951 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LdlrP35951 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LdlrP35951 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
LdlrP35951 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LdlrP35951 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm24350-201ENSMUST00000104163 133 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm23133-201ENSMUST00000104255 135 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm24855-201ENSMUST00000104848 97 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm12294-201ENSMUST00000119723 490 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm25389-201ENSMUST00000157340 286 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LdlrP35951 Gm17060-201ENSMUST00000172394 824 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm27541-201ENSMUST00000184078 122 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm37421-201ENSMUST00000193088 132 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm37889-201ENSMUST00000194174 251 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm20940-201ENSMUST00000197308 360 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm17906-201ENSMUST00000202480 901 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm45032-201ENSMUST00000205375 520 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.03□□□□□ -1.6
LdlrP35951 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
LdlrP35951 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LdlrP35951 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LdlrP35951 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm25578-201ENSMUST00000083406 104 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Mir342-201ENSMUST00000083502 99 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LdlrP35951 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LdlrP35951 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LdlrP35951 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.03□□□□□ -1.6
LdlrP35951 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LdlrP35951 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LdlrP35951 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LdlrP35951 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LdlrP35951 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
LdlrP35951 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LdlrP35951 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LdlrP35951 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LdlrP35951 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LdlrP35951 Gm24160-201ENSMUST00000104594 126 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LdlrP35951 Gm12039-201ENSMUST00000118219 180 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Gm15126-201ENSMUST00000118631 833 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Gm11975-201ENSMUST00000118772 481 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Gm15312-201ENSMUST00000118827 271 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LdlrP35951 Gm15309-201ENSMUST00000121644 240 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LdlrP35951 Gm26310-201ENSMUST00000157766 117 ntBASIC5.02□□□□□ -1.61
LdlrP35951 Gm22733-201ENSMUST00000158094 91 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms