Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.73□□□□□ -1.81
P20040 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
P20040 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.72□□□□□ -1.81
P20040 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
P20040 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.72□□□□□ -1.81
P20040 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
P20040 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.72□□□□□ -1.81
P20040 Gm15180-201ENSMUST00000117745 492 ntBASIC3.72□□□□□ -1.81
P20040 Gm12392-201ENSMUST00000118014 938 ntBASIC3.72□□□□□ -1.81
P20040 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.72□□□□□ -1.81
P20040 Gm14771-201ENSMUST00000118249 203 ntBASIC3.72□□□□□ -1.81
P20040 Gm5060-201ENSMUST00000120072 599 ntBASIC3.72□□□□□ -1.81
P20040 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.72□□□□□ -1.81
P20040 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.72□□□□□ -1.81
P20040 Gm14589-201ENSMUST00000121640 727 ntBASIC3.72□□□□□ -1.81
P20040 Gm23789-201ENSMUST00000122536 301 ntBASIC3.72□□□□□ -1.81
P20040 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.72□□□□□ -1.81
P20040 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
P20040 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.72□□□□□ -1.81
P20040 Gm29320-201ENSMUST00000185235 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm29179-202ENSMUST00000186138 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm29448-201ENSMUST00000186675 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm29314-201ENSMUST00000186800 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm28253-202ENSMUST00000187971 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm5252-201ENSMUST00000189030 909 ntBASIC3.72□□□□□ -1.81
P20040 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.72□□□□□ -1.81
P20040 Gm29196-201ENSMUST00000189239 618 ntBASIC3.72□□□□□ -1.81
P20040 Gm29169-201ENSMUST00000189835 615 ntBASIC3.72□□□□□ -1.81
P20040 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
P20040 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.72□□□□□ -1.81
P20040 Gm38330-201ENSMUST00000192743 959 ntBASIC3.72□□□□□ -1.81
P20040 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
P20040 Gm8774-201ENSMUST00000203621 692 ntBASIC3.72□□□□□ -1.81
P20040 Gm45031-201ENSMUST00000206800 288 ntBASIC3.72□□□□□ -1.81
P20040 Gm6303-201ENSMUST00000210123 471 ntBASIC3.72□□□□□ -1.81
P20040 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.72□□□□□ -1.81
P20040 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.72□□□□□ -1.81
P20040 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.72□□□□□ -1.81
P20040 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.72□□□□□ -1.81
P20040 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.72□□□□□ -1.81
P20040 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.72□□□□□ -1.81
P20040 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
P20040 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
P20040 Snord14e-201ENSMUST00000082857 90 ntBASIC3.72□□□□□ -1.81
P20040 Gm23099-201ENSMUST00000083454 139 ntBASIC3.72□□□□□ -1.81
P20040 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.72□□□□□ -1.81
P20040 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
P20040 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
P20040 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.72□□□□□ -1.81
P20040 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
P20040 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.72□□□□□ -1.81
P20040 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
P20040 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.72□□□□□ -1.81
P20040 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
P20040 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.72□□□□□ -1.81
P20040 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
P20040 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
P20040 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
P20040 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
P20040 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
P20040 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.71□□□□□ -1.82
P20040 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
P20040 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.71□□□□□ -1.82
P20040 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.71□□□□□ -1.82
P20040 Gm26367-201ENSMUST00000104165 132 ntBASIC3.71□□□□□ -1.82
P20040 Gm26143-201ENSMUST00000104480 108 ntBASIC3.71□□□□□ -1.82
P20040 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.71□□□□□ -1.82
P20040 Gm16082-201ENSMUST00000115992 377 ntBASIC3.71□□□□□ -1.82
P20040 Gm12087-201ENSMUST00000121878 258 ntBASIC3.71□□□□□ -1.82
P20040 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm10444-201ENSMUST00000126708 148 ntBASIC3.71□□□□□ -1.82
P20040 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm24224-201ENSMUST00000158828 258 ntBASIC3.71□□□□□ -1.82
P20040 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.71□□□□□ -1.82
P20040 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.71□□□□□ -1.82
P20040 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.71□□□□□ -1.82
P20040 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.71□□□□□ -1.82
P20040 Gm27611-201ENSMUST00000184690 108 ntBASIC3.71□□□□□ -1.82
P20040 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.71□□□□□ -1.82
P20040 Gm43841-201ENSMUST00000199491 586 ntBASIC3.71□□□□□ -1.82
P20040 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.71□□□□□ -1.82
P20040 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
P20040 Gm44765-201ENSMUST00000206927 601 ntBASIC3.71□□□□□ -1.82
P20040 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.71□□□□□ -1.82
P20040 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.71□□□□□ -1.82
P20040 Gm18320-201ENSMUST00000211304 595 ntBASIC3.71□□□□□ -1.82
P20040 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
P20040 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.71□□□□□ -1.82
P20040 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms