Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TnfP06804 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.22□□□□□ -1.73
TnfP06804 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.22□□□□□ -1.73
TnfP06804 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TnfP06804 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.22□□□□□ -1.73
TnfP06804 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TnfP06804 Gm24541-201ENSMUST00000103871 96 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm26418-201ENSMUST00000104275 137 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm11406-201ENSMUST00000117418 484 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TnfP06804 Gm25436-201ENSMUST00000158275 145 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm10357-201ENSMUST00000159886 264 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm2862-201ENSMUST00000161524 328 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm16318-201ENSMUST00000162402 601 ntBASIC4.22□□□□□ -1.73
TnfP06804 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.22□□□□□ -1.73
TnfP06804 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TnfP06804 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm29610-201ENSMUST00000187749 453 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm42625-201ENSMUST00000198611 922 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm43925-201ENSMUST00000203498 206 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm8745-201ENSMUST00000207846 782 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm6240-201ENSMUST00000208014 473 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm45162-201ENSMUST00000209013 618 ntBASIC4.22□□□□□ -1.73
TnfP06804 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.22□□□□□ -1.73
TnfP06804 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm46996-201ENSMUST00000220924 408 ntBASIC4.22□□□□□ -1.73
TnfP06804 Gm23518-201ENSMUST00000082835 153 ntBASIC4.22□□□□□ -1.73
TnfP06804 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TnfP06804 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.22□□□□□ -1.73
TnfP06804 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TnfP06804 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TnfP06804 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TnfP06804 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.21□□□□□ -1.73
TnfP06804 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
TnfP06804 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TnfP06804 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TnfP06804 Gm11566-201ENSMUST00000118550 203 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm11325-201ENSMUST00000119967 469 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.21□□□□□ -1.74
TnfP06804 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TnfP06804 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TnfP06804 Gm26276-201ENSMUST00000157099 109 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm23959-201ENSMUST00000157208 324 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm24905-201ENSMUST00000158129 104 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm22367-201ENSMUST00000178930 132 ntBASIC4.21□□□□□ -1.74
TnfP06804 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.21□□□□□ -1.74
TnfP06804 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.21□□□□□ -1.74
TnfP06804 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TnfP06804 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.21□□□□□ -1.74
TnfP06804 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.21□□□□□ -1.74
TnfP06804 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.21□□□□□ -1.74
TnfP06804 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TnfP06804 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TnfP06804 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.2□□□□□ -1.74
TnfP06804 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 Mir690-201ENSMUST00000102110 109 ntBASIC4.2□□□□□ -1.74
TnfP06804 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TnfP06804 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.2□□□□□ -1.74
TnfP06804 Gm12564-201ENSMUST00000119860 321 ntBASIC4.2□□□□□ -1.74
TnfP06804 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.2□□□□□ -1.74
TnfP06804 Gm23198-201ENSMUST00000158811 91 ntBASIC4.2□□□□□ -1.74
TnfP06804 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.2□□□□□ -1.74
TnfP06804 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.2□□□□□ -1.74
TnfP06804 Mir713-201ENSMUST00000178651 108 ntBASIC4.2□□□□□ -1.74
TnfP06804 Gm37490-201ENSMUST00000195566 724 ntBASIC4.2□□□□□ -1.74
TnfP06804 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.2□□□□□ -1.74
TnfP06804 Gm45553-201ENSMUST00000209929 507 ntBASIC4.2□□□□□ -1.74
TnfP06804 Gm45710-201ENSMUST00000212847 215 ntBASIC4.2□□□□□ -1.74
TnfP06804 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TnfP06804 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.2□□□□□ -1.74
TnfP06804 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.2□□□□□ -1.74
TnfP06804 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TnfP06804 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TnfP06804 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TnfP06804 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.2□□□□□ -1.74
TnfP06804 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.2□□□□□ -1.74
TnfP06804 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TnfP06804 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TnfP06804 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.19□□□□□ -1.74
TnfP06804 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TnfP06804 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.19□□□□□ -1.74
TnfP06804 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TnfP06804 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TnfP06804 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.19□□□□□ -1.74
TnfP06804 Gm6584-201ENSMUST00000119671 447 ntBASIC4.19□□□□□ -1.74
TnfP06804 Gm25843-201ENSMUST00000122582 314 ntBASIC4.19□□□□□ -1.74
TnfP06804 Gm23958-201ENSMUST00000157207 105 ntBASIC4.19□□□□□ -1.74
TnfP06804 Gm25058-201ENSMUST00000157365 128 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms