Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm12328-201ENSMUST00000118611 197 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm9003-201ENSMUST00000121810 482 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm26476-201ENSMUST00000122618 313 ntBASIC3.93□□□□□ -1.78
CopeO89079 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CopeO89079 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CopeO89079 Gm25150-201ENSMUST00000157121 60 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm16571-201ENSMUST00000159112 291 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm7241-201ENSMUST00000159853 357 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CopeO89079 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.93□□□□□ -1.78
CopeO89079 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.93□□□□□ -1.78
CopeO89079 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC3.93□□□□□ -1.78
CopeO89079 Gm18900-201ENSMUST00000193218 584 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CopeO89079 Gm37836-201ENSMUST00000195875 175 ntBASIC3.93□□□□□ -1.78
CopeO89079 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.93□□□□□ -1.78
CopeO89079 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.93□□□□□ -1.78
CopeO89079 Gm31931-201ENSMUST00000219666 222 ntBASIC3.93□□□□□ -1.78
CopeO89079 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.93□□□□□ -1.78
CopeO89079 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.93□□□□□ -1.78
CopeO89079 AV026068-224ENSMUST00000224827 928 ntBASIC3.93□□□□□ -1.78
CopeO89079 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.93□□□□□ -1.78
CopeO89079 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CopeO89079 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CopeO89079 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.93□□□□□ -1.78
CopeO89079 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CopeO89079 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.92□□□□□ -1.78
CopeO89079 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CopeO89079 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CopeO89079 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Gm15151-201ENSMUST00000117106 177 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm11746-201ENSMUST00000119843 821 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm12190-201ENSMUST00000120001 187 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm11645-201ENSMUST00000121589 649 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm11692-201ENSMUST00000122121 902 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Gm6058-201ENSMUST00000154261 399 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm25965-201ENSMUST00000157170 93 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm24444-201ENSMUST00000157244 308 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm6625-201ENSMUST00000177870 272 ntBASIC3.92□□□□□ -1.78
CopeO89079 Mir6903-201ENSMUST00000183597 88 ntBASIC3.92□□□□□ -1.78
CopeO89079 Mir6410-201ENSMUST00000184204 104 ntBASIC3.92□□□□□ -1.78
CopeO89079 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.92□□□□□ -1.78
CopeO89079 Gm3496-201ENSMUST00000188283 745 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm29196-201ENSMUST00000189239 618 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Gm38270-201ENSMUST00000192721 407 ntBASIC3.92□□□□□ -1.78
CopeO89079 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.92□□□□□ -1.78
CopeO89079 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.92□□□□□ -1.78
CopeO89079 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CopeO89079 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CopeO89079 Gm23443-201ENSMUST00000082916 128 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
CopeO89079 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.92□□□□□ -1.78
CopeO89079 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CopeO89079 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CopeO89079 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CopeO89079 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.91□□□□□ -1.78
CopeO89079 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.91□□□□□ -1.78
CopeO89079 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CopeO89079 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CopeO89079 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CopeO89079 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm15313-201ENSMUST00000119179 282 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm14229-201ENSMUST00000121178 850 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm24382-201ENSMUST00000122698 107 ntBASIC3.91□□□□□ -1.78
CopeO89079 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CopeO89079 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CopeO89079 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.91□□□□□ -1.78
CopeO89079 Gm25655-201ENSMUST00000158465 290 ntBASIC3.91□□□□□ -1.78
CopeO89079 Scarna6-201ENSMUST00000158656 265 ntBASIC3.91□□□□□ -1.78
CopeO89079 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.91□□□□□ -1.78
CopeO89079 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.91□□□□□ -1.78
CopeO89079 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.91□□□□□ -1.78
CopeO89079 Mir7056-201ENSMUST00000183776 59 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.91□□□□□ -1.78
CopeO89079 Gm44343-201ENSMUST00000196702 90 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm18791-201ENSMUST00000204611 726 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm44869-201ENSMUST00000208836 357 ntBASIC3.91□□□□□ -1.78
CopeO89079 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.91□□□□□ -1.78
CopeO89079 Gm45727-201ENSMUST00000212886 572 ntBASIC3.91□□□□□ -1.78
CopeO89079 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CopeO89079 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.91□□□□□ -1.78
CopeO89079 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.91□□□□□ -1.78
CopeO89079 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms