Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 BC051076-202ENSMUST00000199477 2868 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.18□□□□□ -1.9
Hmgb3O54879 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm22778-201ENSMUST00000104090 128 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm12173-201ENSMUST00000117622 273 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm12852-201ENSMUST00000119478 719 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm12515-201ENSMUST00000120116 361 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm14037-201ENSMUST00000120576 313 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm15168-201ENSMUST00000121057 316 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm14916-201ENSMUST00000121904 204 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm14768-201ENSMUST00000122126 678 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm23789-201ENSMUST00000122536 301 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm23743-201ENSMUST00000157389 274 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm36954-201ENSMUST00000195362 363 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm44343-201ENSMUST00000196702 90 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm43945-201ENSMUST00000203595 754 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm44869-201ENSMUST00000208836 357 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm17989-201ENSMUST00000211543 412 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm22868-201ENSMUST00000083955 164 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Zfp850-201ENSMUST00000099111 941 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgb3O54879 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Hmgb3O54879 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.17□□□□□ -1.9
Hmgb3O54879 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm12931-201ENSMUST00000117046 324 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm11719-201ENSMUST00000119399 351 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm25843-201ENSMUST00000122582 314 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm24113-201ENSMUST00000157477 276 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm27535-201ENSMUST00000183814 157 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm27883-201ENSMUST00000183941 102 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm9687-201ENSMUST00000189312 602 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm29334-201ENSMUST00000190334 357 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm43524-201ENSMUST00000197278 298 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm19131-201ENSMUST00000203408 789 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.16□□□□□ -1.9
Hmgb3O54879 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.16□□□□□ -1.9
Hmgb3O54879 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgb3O54879 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgb3O54879 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms