Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm26153-201ENSMUST00000157433 127 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm25383-201ENSMUST00000157810 144 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Mir5106-201ENSMUST00000174936 73 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clk3O35492 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clk3O35492 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.47□□□□□ -1.69
Clk3O35492 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm29524-201ENSMUST00000190819 699 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm17893-201ENSMUST00000203017 770 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm44523-201ENSMUST00000205616 417 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm44879-201ENSMUST00000207007 503 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clk3O35492 AC159297.2-201ENSMUST00000219567 1075 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm7040-201ENSMUST00000223271 443 ntBASIC4.47□□□□□ -1.69
Clk3O35492 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.47□□□□□ -1.69
Clk3O35492 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clk3O35492 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clk3O35492 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clk3O35492 Gm23626-201ENSMUST00000082458 133 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm21286-201ENSMUST00000098035 545 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm10704-201ENSMUST00000098952 730 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clk3O35492 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clk3O35492 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clk3O35492 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clk3O35492 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.47□□□□□ -1.69
Clk3O35492 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Clk3O35492 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Clk3O35492 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Clk3O35492 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Clk3O35492 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Clk3O35492 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Mir147-201ENSMUST00000102354 79 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Mir669p-2-201ENSMUST00000103868 87 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Mir669p-1-201ENSMUST00000103884 87 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm23431-201ENSMUST00000104006 107 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Clk3O35492 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm11346-201ENSMUST00000118346 704 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm11822-201ENSMUST00000119177 415 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm2930-201ENSMUST00000170403 474 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Gm18416-201ENSMUST00000175635 1003 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Clk3O35492 Mir6344-201ENSMUST00000183462 104 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm28974-201ENSMUST00000187893 231 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm28061-201ENSMUST00000189085 807 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm37288-201ENSMUST00000193963 334 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm2053-201ENSMUST00000195671 631 ntBASIC4.46□□□□□ -1.7
Clk3O35492 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm18327-201ENSMUST00000202426 830 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.46□□□□□ -1.7
Clk3O35492 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm46138-201ENSMUST00000215294 426 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Clk3O35492 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clk3O35492 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.46□□□□□ -1.7
Clk3O35492 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.46□□□□□ -1.7
Clk3O35492 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.46□□□□□ -1.7
Clk3O35492 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.46□□□□□ -1.7
Clk3O35492 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clk3O35492 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Clk3O35492 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clk3O35492 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Clk3O35492 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms