Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm20177-201ENSMUST00000203705 334 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Neat1-201ENSMUST00000173672 20771 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Gm45259-201ENSMUST00000209217 1006 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Gm19219-201ENSMUST00000215863 724 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Scn3aA2ASI5 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm13121-201ENSMUST00000120637 632 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm11829-201ENSMUST00000121003 282 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm26476-201ENSMUST00000122618 313 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm36934-201ENSMUST00000192007 306 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm19366-201ENSMUST00000206996 156 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Mir504-201ENSMUST00000093602 79 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm22840-201ENSMUST00000158444 136 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Gm8319-201ENSMUST00000205708 641 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Scn3aA2ASI5 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm24982-201ENSMUST00000104456 132 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm11869-201ENSMUST00000118701 329 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm18194-201ENSMUST00000210455 481 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm19073-201ENSMUST00000219978 555 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.22□□□□□ -1.73
Scn3aA2ASI5 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Scn3aA2ASI5 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms