Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm24067-201ENSMUST00000104514 85 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm15553-201ENSMUST00000118757 430 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm5754-201ENSMUST00000118774 892 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm11822-201ENSMUST00000119177 415 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm6797-201ENSMUST00000119440 512 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm16373-201ENSMUST00000129517 303 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm23231-201ENSMUST00000157299 104 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm19231-201ENSMUST00000193212 830 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm42438-201ENSMUST00000197832 974 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm43408-201ENSMUST00000198263 440 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Mir6906-201ENSMUST00000198998 58 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm44665-201ENSMUST00000205381 251 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm45247-201ENSMUST00000210757 309 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 CT030238.1-201ENSMUST00000228393 442 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Gm23510-201ENSMUST00000083083 163 ntBASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trem1Q9JKE2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trem1Q9JKE2 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trem1Q9JKE2 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trem1Q9JKE2 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Trem1Q9JKE2 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm3943-201ENSMUST00000118606 718 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm5943-201ENSMUST00000119458 459 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm14589-201ENSMUST00000121640 727 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm22106-201ENSMUST00000122544 127 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm4660-201ENSMUST00000131499 403 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm10319-202ENSMUST00000159439 846 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm17109-201ENSMUST00000163985 358 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Mir7211-201ENSMUST00000184071 63 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm20954-201ENSMUST00000189078 644 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm5731-201ENSMUST00000190969 481 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm38088-201ENSMUST00000195829 241 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm42451-201ENSMUST00000197410 244 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm43975-201ENSMUST00000203023 481 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm44048-201ENSMUST00000204531 361 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm45026-201ENSMUST00000205292 833 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm22245-201ENSMUST00000082479 103 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm22304-201ENSMUST00000082688 129 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm25739-201ENSMUST00000082886 107 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 n-R5s36-201ENSMUST00000082998 119 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms