Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm26078-201ENSMUST00000104067 128 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm7429-201ENSMUST00000118664 348 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm14815-201ENSMUST00000120060 488 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm13259-201ENSMUST00000120792 456 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm6081-201ENSMUST00000134472 489 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm6956-201ENSMUST00000134724 546 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm24692-201ENSMUST00000157761 146 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm23224-201ENSMUST00000158122 271 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm20401-201ENSMUST00000173717 212 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Mir3095-201ENSMUST00000175552 87 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm5284-201ENSMUST00000199053 903 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm43929-201ENSMUST00000203025 409 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm18409-202ENSMUST00000220105 529 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 AC154552.1-201ENSMUST00000222969 202 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 AC151833.1-201ENSMUST00000227752 574 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm23795-201ENSMUST00000084006 137 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm44708-201ENSMUST00000205580 2237 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 CT030170.3-201ENSMUST00000221205 1815 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm43201-201ENSMUST00000195925 3416 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm23691-201ENSMUST00000101878 107 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm12448-201ENSMUST00000118852 655 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm25152-201ENSMUST00000157117 114 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm24001-201ENSMUST00000158463 85 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm29201-201ENSMUST00000189120 431 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm42539-201ENSMUST00000197009 308 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 LOC665443-201ENSMUST00000212284 796 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm22229-201ENSMUST00000082987 108 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ube3bQ9ES34 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ube3bQ9ES34 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms