Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43440-201ENSMUST00000201957 729 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm45392-201ENSMUST00000210441 214 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm4928-201ENSMUST00000219622 850 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm22423-201ENSMUST00000082861 184 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm14500-201ENSMUST00000121647 113 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm23959-201ENSMUST00000157208 324 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm24965-201ENSMUST00000157922 106 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm25224-201ENSMUST00000158195 68 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm9890-201ENSMUST00000171867 537 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm27760-201ENSMUST00000185048 114 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm43586-201ENSMUST00000195948 310 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm31532-201ENSMUST00000203555 767 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm36247-201ENSMUST00000211834 285 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 AC122465.3-201ENSMUST00000221644 355 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Gm6462-201ENSMUST00000081488 304 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Smc1aQ9CU62 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Mir105-201ENSMUST00000104655 80 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm15021-201ENSMUST00000117832 742 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm14303-201ENSMUST00000121320 171 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm14122-201ENSMUST00000122076 973 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm24961-201ENSMUST00000157918 184 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm25456-201ENSMUST00000157952 109 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm25606-201ENSMUST00000158363 95 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm13249-201ENSMUST00000177803 345 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm13144-201ENSMUST00000179385 345 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm28304-201ENSMUST00000185977 312 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm5368-201ENSMUST00000189012 589 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm29256-201ENSMUST00000189094 312 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm28484-201ENSMUST00000190606 312 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm44059-201ENSMUST00000204048 351 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.78□□□□□ -1.64
Smc1aQ9CU62 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms