Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm14365-201ENSMUST00000117535 587 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm16128-201ENSMUST00000117855 626 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm14750-201ENSMUST00000118262 516 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm14875-201ENSMUST00000120881 319 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm23513-201ENSMUST00000158181 133 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm24224-201ENSMUST00000158828 258 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm27805-201ENSMUST00000184513 79 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm27355-201ENSMUST00000185045 128 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm28877-201ENSMUST00000191349 604 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm38046-201ENSMUST00000192733 550 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm38332-201ENSMUST00000194189 147 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm18193-201ENSMUST00000210017 772 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Use1Q9CQ56 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm22826-201ENSMUST00000083774 165 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Use1Q9CQ56 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.91□□□□□ -1.78
Use1Q9CQ56 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.9□□□□□ -1.78
Use1Q9CQ56 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Use1Q9CQ56 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Use1Q9CQ56 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Use1Q9CQ56 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.9□□□□□ -1.78
Use1Q9CQ56 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm15385-201ENSMUST00000118725 667 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm14933-201ENSMUST00000118840 481 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm12577-201ENSMUST00000119701 574 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm12685-201ENSMUST00000121702 214 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm14916-201ENSMUST00000121904 204 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm23743-201ENSMUST00000157389 274 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm22135-201ENSMUST00000158752 108 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm16490-201ENSMUST00000165299 351 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm20674-201ENSMUST00000177452 369 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm8604-201ENSMUST00000183150 965 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm27190-201ENSMUST00000184890 542 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm28923-201ENSMUST00000187755 322 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm43631-201ENSMUST00000202011 369 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm45081-201ENSMUST00000206281 572 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm7407-201ENSMUST00000208301 568 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Use1Q9CQ56 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.9□□□□□ -1.79
Use1Q9CQ56 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Use1Q9CQ56 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm26367-201ENSMUST00000104165 132 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm24788-201ENSMUST00000104283 156 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm13664-201ENSMUST00000117304 345 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm16089-201ENSMUST00000117679 336 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm11404-201ENSMUST00000120872 494 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm22314-201ENSMUST00000158007 281 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm15796-201ENSMUST00000162135 204 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Use1Q9CQ56 Gm27952-201ENSMUST00000184748 105 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms