Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm23623-201ENSMUST00000082461 107 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm15076-201ENSMUST00000117076 474 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm12891-201ENSMUST00000119358 240 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm7363-201ENSMUST00000119883 399 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm12155-201ENSMUST00000121267 160 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm11200-201ENSMUST00000121698 448 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm16254-201ENSMUST00000131528 730 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm22724-201ENSMUST00000158091 127 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm23806-201ENSMUST00000175157 109 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm25874-201ENSMUST00000178030 79 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm28299-201ENSMUST00000189908 339 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm28640-201ENSMUST00000190918 550 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm43115-201ENSMUST00000196244 160 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm10709-201ENSMUST00000213318 480 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm20304-201ENSMUST00000218168 444 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Mir143-201ENSMUST00000083511 63 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm10794-201ENSMUST00000099624 207 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.3□□□□□ -1.4
Trim11Q99PQ2 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim11Q99PQ2 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm13331-201ENSMUST00000117500 448 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm12186-201ENSMUST00000119050 945 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm22236-201ENSMUST00000157093 106 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm26046-201ENSMUST00000157312 166 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm25243-201ENSMUST00000174912 207 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm24957-201ENSMUST00000179604 132 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm5527-201ENSMUST00000179821 642 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm28408-201ENSMUST00000191557 463 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm37164-201ENSMUST00000192809 637 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm9173-201ENSMUST00000198054 400 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm44161-201ENSMUST00000203532 253 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AW046200-203ENSMUST00000211787 2479 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms