Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm6884-201ENSMUST00000119318 615 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm24507-201ENSMUST00000157683 134 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm24689-201ENSMUST00000157760 104 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm25981-201ENSMUST00000157921 295 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm37670-201ENSMUST00000193622 229 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm45857-201ENSMUST00000212207 356 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm18774-201ENSMUST00000218269 601 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm25537-201ENSMUST00000103851 109 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm13803-201ENSMUST00000117547 489 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm14899-201ENSMUST00000118673 548 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm12189-201ENSMUST00000119779 912 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm12704-201ENSMUST00000119789 464 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm24774-201ENSMUST00000157384 134 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm22326-201ENSMUST00000158897 351 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm20701-201ENSMUST00000176082 347 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm5974-201ENSMUST00000181607 986 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm27539-201ENSMUST00000184971 224 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm28596-201ENSMUST00000185870 696 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm32295-201ENSMUST00000192558 696 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm31260-201ENSMUST00000193478 696 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm31230-201ENSMUST00000199725 785 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm29848-201ENSMUST00000203107 295 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm9375-201ENSMUST00000208899 903 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 AC153971.2-201ENSMUST00000214553 777 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm29809-201ENSMUST00000218423 493 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm37562-201ENSMUST00000194763 4328 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm42704-201ENSMUST00000196875 1778 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Usp40Q8BWR4 Gm37916-201ENSMUST00000192153 2435 ntBASIC6.52□□□□□ -1.36
Usp40Q8BWR4 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Snord116l9-201ENSMUST00000101891 94 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm26504-201ENSMUST00000102033 94 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm12370-201ENSMUST00000117809 604 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm14933-201ENSMUST00000118840 481 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm14725-201ENSMUST00000120324 828 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm12578-201ENSMUST00000121244 417 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm12045-201ENSMUST00000122122 573 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm16250-201ENSMUST00000148974 256 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm22755-201ENSMUST00000157143 100 ntBASIC6.52□□□□□ -1.37
Usp40Q8BWR4 Gm22277-201ENSMUST00000157204 277 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms