Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Scaf4Q6PFF0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm8202-201ENSMUST00000117682 310 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm9429-201ENSMUST00000117804 868 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm14987-201ENSMUST00000117820 676 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm13835-201ENSMUST00000118459 685 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm14106-201ENSMUST00000119382 438 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm15493-201ENSMUST00000119461 528 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm14927-201ENSMUST00000120283 454 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm2768-201ENSMUST00000121062 250 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm25660-201ENSMUST00000158470 104 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm20794-201ENSMUST00000177626 628 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm21070-201ENSMUST00000182425 985 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm27796-201ENSMUST00000183863 261 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm27679-201ENSMUST00000184612 84 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm28058-201ENSMUST00000186421 264 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm43652-201ENSMUST00000196219 675 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm43114-201ENSMUST00000198298 343 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm44312-201ENSMUST00000203536 469 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm45063-201ENSMUST00000203726 472 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm25859-201ENSMUST00000083710 91 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scaf4Q6PFF0 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Gm26144-201ENSMUST00000104475 132 ntBASIC5.31□□□□□ -1.56
Scaf4Q6PFF0 Gm13013-201ENSMUST00000119087 523 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms