Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm15300-201ENSMUST00000122324 279 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm16164-201ENSMUST00000160078 468 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm9006-201ENSMUST00000165520 841 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm20526-201ENSMUST00000173416 158 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm9127-201ENSMUST00000188041 985 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm29573-201ENSMUST00000190291 919 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm45316-201ENSMUST00000210128 162 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm18194-201ENSMUST00000210455 481 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm23097-201ENSMUST00000083448 105 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf220Q6PDX6 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Svet1-201ENSMUST00000209370 3940 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm22231-201ENSMUST00000101027 73 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm3940-201ENSMUST00000105087 432 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm15025-201ENSMUST00000118434 418 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm11219-201ENSMUST00000118565 358 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm15443-201ENSMUST00000118947 820 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm12495-201ENSMUST00000119750 447 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm11829-201ENSMUST00000121003 282 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm12413-201ENSMUST00000121508 312 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm24836-201ENSMUST00000122609 108 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm2020-201ENSMUST00000145242 579 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm23233-201ENSMUST00000157301 137 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm22765-201ENSMUST00000158371 128 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm3030-201ENSMUST00000163410 516 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20620-201ENSMUST00000177528 168 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm7745-201ENSMUST00000182235 973 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm27539-201ENSMUST00000184971 224 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm29299-201ENSMUST00000185609 923 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28604-201ENSMUST00000186629 484 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28566-201ENSMUST00000186714 484 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28194-201ENSMUST00000187412 484 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28886-202ENSMUST00000187889 484 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm28554-202ENSMUST00000189175 484 ntBASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Rnf220Q6PDX6 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms