Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm43313-201ENSMUST00000201398 2235 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm26376-201ENSMUST00000104784 110 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm14750-201ENSMUST00000118262 516 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm3531-201ENSMUST00000162698 489 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm17149-201ENSMUST00000164712 375 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm18343-201ENSMUST00000172802 604 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm9317-201ENSMUST00000197055 862 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Mir194-1-201ENSMUST00000083647 67 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Gm25187-201ENSMUST00000083906 133 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim41Q5NCC3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm19368-201ENSMUST00000221258 4424 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Mir883a-201ENSMUST00000104824 76 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm13733-201ENSMUST00000117290 535 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm14382-201ENSMUST00000117374 437 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm11881-201ENSMUST00000119408 572 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm13338-201ENSMUST00000120235 361 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm13259-201ENSMUST00000120792 456 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm23144-201ENSMUST00000180226 107 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 AC124445.1-201ENSMUST00000218613 452 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 AC126554.1-201ENSMUST00000222161 271 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 AC165092.3-201ENSMUST00000223602 282 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm24928-201ENSMUST00000083399 107 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Gm25897-201ENSMUST00000083709 107 ntBASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim41Q5NCC3 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm15660-201ENSMUST00000118997 478 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm6797-201ENSMUST00000119440 512 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Api5-ps-201ENSMUST00000206607 577 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm2607-201ENSMUST00000212389 627 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 AC139638.1-201ENSMUST00000218027 364 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm4263-201ENSMUST00000220693 1101 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm9318-201ENSMUST00000222444 438 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm25579-201ENSMUST00000083407 106 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm24029-201ENSMUST00000083928 143 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Olfr203-201ENSMUST00000089305 924 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Gm38224-201ENSMUST00000191648 2100 ntBASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trim41Q5NCC3 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm12074-201ENSMUST00000120189 219 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Gm22569-201ENSMUST00000175545 124 ntBASIC10.21□□□□□ -0.77
Trim41Q5NCC3 Mir6413-201ENSMUST00000184049 108 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 183.8 ms