Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm11393-201ENSMUST00000118019 288 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm12379-201ENSMUST00000119607 391 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm12335-201ENSMUST00000119738 327 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm24664-201ENSMUST00000158939 100 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm45269-201ENSMUST00000210359 282 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm4736-201ENSMUST00000100870 380 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm14605-201ENSMUST00000120599 268 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm14845-201ENSMUST00000121259 306 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm7618-201ENSMUST00000121643 171 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm22792-201ENSMUST00000157225 133 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm26373-201ENSMUST00000157833 103 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Mir6374-201ENSMUST00000184003 107 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm34779-201ENSMUST00000210036 263 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.32□□□□□ -1.72
Upf3aQ3ULJ3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm14991-201ENSMUST00000119913 598 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm25106-201ENSMUST00000122672 134 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm26276-201ENSMUST00000157099 109 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm10067-201ENSMUST00000179462 348 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Trbv27-201ENSMUST00000193711 277 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm44099-201ENSMUST00000203299 112 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm19908-201ENSMUST00000204684 391 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm45200-201ENSMUST00000207434 919 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm6195-201ENSMUST00000063059 357 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Mir99a-201ENSMUST00000083596 65 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Svet1-201ENSMUST00000209370 3940 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3aQ3ULJ3 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Gm13478-201ENSMUST00000118312 413 ntBASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Gm24441-201ENSMUST00000157235 281 ntBASIC4.3□□□□□ -1.72
Upf3aQ3ULJ3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms