Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm38067-201ENSMUST00000192346 1911 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm25595-201ENSMUST00000102273 97 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm11970-201ENSMUST00000116105 320 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm12813-201ENSMUST00000119615 902 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm11398-201ENSMUST00000120330 320 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm11414-201ENSMUST00000121795 263 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm22398-201ENSMUST00000174941 125 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm25731-201ENSMUST00000175167 125 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm28190-201ENSMUST00000189766 722 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm38126-201ENSMUST00000195297 4003 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Spg11Q3UHA3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Gm14050-201ENSMUST00000117052 346 ntBASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Gm22322-201ENSMUST00000157151 111 ntBASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Gm16545-201ENSMUST00000161968 463 ntBASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC3.65□□□□□ -1.82
Spg11Q3UHA3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
Spg11Q3UHA3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm22135-201ENSMUST00000158752 108 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm43155-201ENSMUST00000202661 494 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm18602-201ENSMUST00000209794 851 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm45252-201ENSMUST00000211579 397 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm6841-201ENSMUST00000220602 598 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm43696-201ENSMUST00000199385 6071 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.65□□□□□ -1.83
Spg11Q3UHA3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Spg11Q3UHA3 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm24318-201ENSMUST00000104490 131 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm14516-201ENSMUST00000120012 252 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm25295-201ENSMUST00000122794 306 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm43390-201ENSMUST00000196614 421 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm19039-201ENSMUST00000204363 575 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm26300-201ENSMUST00000102282 94 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm8747-201ENSMUST00000195392 751 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Gm25820-201ENSMUST00000198589 127 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Spg11Q3UHA3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Spg11Q3UHA3 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms