Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Gm33163-201ENSMUST00000194504 614 ntBASIC4.8□□□□□ -1.64
CiitaP79621 Gm37002-201ENSMUST00000194560 373 ntBASIC4.8□□□□□ -1.64
CiitaP79621 Gm38268-201ENSMUST00000195813 193 ntBASIC4.8□□□□□ -1.64
CiitaP79621 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CiitaP79621 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.8□□□□□ -1.64
CiitaP79621 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.8□□□□□ -1.64
CiitaP79621 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.8□□□□□ -1.64
CiitaP79621 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.8□□□□□ -1.64
CiitaP79621 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.8□□□□□ -1.64
CiitaP79621 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CiitaP79621 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CiitaP79621 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.8□□□□□ -1.64
CiitaP79621 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CiitaP79621 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.79□□□□□ -1.64
CiitaP79621 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CiitaP79621 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm15426-201ENSMUST00000117823 556 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm13000-201ENSMUST00000120937 496 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm23792-201ENSMUST00000122557 93 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.79□□□□□ -1.64
CiitaP79621 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.79□□□□□ -1.64
CiitaP79621 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CiitaP79621 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CiitaP79621 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm38008-201ENSMUST00000195333 518 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.79□□□□□ -1.64
CiitaP79621 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.79□□□□□ -1.64
CiitaP79621 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.79□□□□□ -1.64
CiitaP79621 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Snord22-201ENSMUST00000083153 126 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CiitaP79621 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.79□□□□□ -1.64
CiitaP79621 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CiitaP79621 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CiitaP79621 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm22019-201ENSMUST00000104359 96 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm14122-201ENSMUST00000122076 973 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm2182-201ENSMUST00000145243 663 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm17194-201ENSMUST00000164610 348 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm17153-201ENSMUST00000171314 490 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm17075-201ENSMUST00000171924 670 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm25037-201ENSMUST00000175418 110 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Rab26os-201ENSMUST00000176215 477 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm29668-201ENSMUST00000187802 315 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm37050-201ENSMUST00000193464 466 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm42830-201ENSMUST00000196642 313 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Gm44389-201ENSMUST00000203795 182 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CiitaP79621 Gm34005-201ENSMUST00000215834 282 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.78□□□□□ -1.64
CiitaP79621 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.78□□□□□ -1.64
CiitaP79621 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.78□□□□□ -1.64
CiitaP79621 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CiitaP79621 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.78□□□□□ -1.64
CiitaP79621 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CiitaP79621 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CiitaP79621 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CiitaP79621 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.77□□□□□ -1.65
CiitaP79621 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms