Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm21617-201ENSMUST00000188297 691 ntBASIC5.88□□□□□ -1.47
Cux1P53564 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cux1P53564 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cux1P53564 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.88□□□□□ -1.47
Cux1P53564 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.88□□□□□ -1.47
Cux1P53564 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.88□□□□□ -1.47
Cux1P53564 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC5.88□□□□□ -1.47
Cux1P53564 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cux1P53564 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cux1P53564 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cux1P53564 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cux1P53564 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cux1P53564 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Gm11233-201ENSMUST00000122357 634 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Gm28186-201ENSMUST00000187447 679 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Gm17966-201ENSMUST00000193453 594 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cux1P53564 Gm20177-201ENSMUST00000203705 334 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Gm44475-201ENSMUST00000204041 424 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Gm6303-201ENSMUST00000210123 471 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.87□□□□□ -1.47
Cux1P53564 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.87□□□□□ -1.47
Cux1P53564 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cux1P53564 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cux1P53564 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Gm37792-201ENSMUST00000195761 3413 ntBASIC5.87□□□□□ -1.47
Cux1P53564 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cux1P53564 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cux1P53564 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cux1P53564 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cux1P53564 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.86□□□□□ -1.47
Cux1P53564 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cux1P53564 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cux1P53564 Gm18903-201ENSMUST00000215343 480 ntBASIC5.86□□□□□ -1.47
Cux1P53564 AC142499.1-201ENSMUST00000220036 374 ntBASIC5.86□□□□□ -1.47
Cux1P53564 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.86□□□□□ -1.47
Cux1P53564 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cux1P53564 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cux1P53564 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.86□□□□□ -1.47
Cux1P53564 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.86□□□□□ -1.47
Cux1P53564 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.86□□□□□ -1.47
Cux1P53564 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cux1P53564 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cux1P53564 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.85□□□□□ -1.47
Cux1P53564 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cux1P53564 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Gm22472-201ENSMUST00000104115 134 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.85□□□□□ -1.47
Cux1P53564 Gm16566-201ENSMUST00000160387 910 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.85□□□□□ -1.47
Cux1P53564 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.85□□□□□ -1.47
Cux1P53564 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cux1P53564 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.85□□□□□ -1.47
Cux1P53564 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cux1P53564 Gm23532-201ENSMUST00000104569 112 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Gm24898-201ENSMUST00000158133 106 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Cux1P53564 Gm28148-201ENSMUST00000186924 697 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Cux1P53564 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.84□□□□□ -1.47
Cux1P53564 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cux1P53564 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cux1P53564 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cux1P53564 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cux1P53564 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cux1P53564 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cux1P53564 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cux1P53564 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.84□□□□□ -1.47
Cux1P53564 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Cux1P53564 Gm9043-201ENSMUST00000119677 314 ntBASIC5.84□□□□□ -1.48
Cux1P53564 Gm15212-201ENSMUST00000122403 466 ntBASIC5.84□□□□□ -1.48
Cux1P53564 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cux1P53564 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cux1P53564 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.84□□□□□ -1.48
Cux1P53564 Gm45157-201ENSMUST00000208729 401 ntBASIC5.84□□□□□ -1.48
Cux1P53564 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cux1P53564 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Cux1P53564 Gm10237-201ENSMUST00000078393 273 ntBASIC5.84□□□□□ -1.48
Cux1P53564 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Cux1P53564 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cux1P53564 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cux1P53564 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cux1P53564 Gm43881-201ENSMUST00000203051 2530 ntBASIC5.83□□□□□ -1.48
Cux1P53564 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cux1P53564 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms