Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm18774-201ENSMUST00000218269 601 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 Gm9762-201ENSMUST00000036976 444 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Shmt1P50431 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Shmt1P50431 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Shmt1P50431 Rny3-201ENSMUST00000083011 102 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 Gm24319-201ENSMUST00000083389 107 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Shmt1P50431 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Shmt1P50431 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Shmt1P50431 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Shmt1P50431 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Shmt1P50431 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.28□□□□□ -1.56
Shmt1P50431 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Shmt1P50431 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm26376-201ENSMUST00000104784 110 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm24855-201ENSMUST00000104848 97 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Mir466i-201ENSMUST00000116924 121 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm13172-201ENSMUST00000118685 256 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm11252-201ENSMUST00000120572 939 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm11200-201ENSMUST00000121698 448 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Shmt1P50431 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm21999-201ENSMUST00000165985 387 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm9587-201ENSMUST00000172449 454 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm20462-201ENSMUST00000172623 408 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm6900-201ENSMUST00000178971 342 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Shmt1P50431 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.27□□□□□ -1.57
Shmt1P50431 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm43418-201ENSMUST00000201334 428 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm33626-201ENSMUST00000206790 828 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm45189-201ENSMUST00000208567 363 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm7822-201ENSMUST00000222433 581 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Shmt1P50431 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.27□□□□□ -1.57
Shmt1P50431 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Shmt1P50431 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Shmt1P50431 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Shmt1P50431 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Shmt1P50431 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Shmt1P50431 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Shmt1P50431 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.26□□□□□ -1.57
Shmt1P50431 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Shmt1P50431 Gm25096-201ENSMUST00000104043 129 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm22019-201ENSMUST00000104359 96 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm7834-201ENSMUST00000117560 437 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm12230-201ENSMUST00000118301 454 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm14991-201ENSMUST00000119913 598 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm15034-201ENSMUST00000120043 349 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.26□□□□□ -1.57
Shmt1P50431 Gm13743-201ENSMUST00000121486 724 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms