Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm15018-201ENSMUST00000117090 633 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm13478-201ENSMUST00000118312 413 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm13852-201ENSMUST00000122350 242 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm25667-201ENSMUST00000157701 275 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm25977-201ENSMUST00000158697 85 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm29704-201ENSMUST00000196011 253 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm17887-201ENSMUST00000200194 547 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm6240-201ENSMUST00000208014 473 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Gm18116-201ENSMUST00000220920 537 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx2P43241 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx2P43241 Gm23925-201ENSMUST00000082471 132 ntBASIC3.84□□□□□ -1.79
Cdx2P43241 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Cdx2P43241 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx2P43241 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Cdx2P43241 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Cdx2P43241 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Cdx2P43241 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Cdx2P43241 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.84□□□□□ -1.8
Cdx2P43241 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm12760-201ENSMUST00000117861 482 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm12897-201ENSMUST00000120341 250 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm13118-201ENSMUST00000120402 549 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm24730-201ENSMUST00000158228 117 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm25436-201ENSMUST00000158275 145 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.83□□□□□ -1.8
Cdx2P43241 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm28871-201ENSMUST00000186191 687 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm7041-201ENSMUST00000201227 524 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm8231-201ENSMUST00000221617 783 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm10916-201ENSMUST00000080330 483 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Cdx2P43241 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx2P43241 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Cdx2P43241 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.83□□□□□ -1.8
Cdx2P43241 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Cdx2P43241 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Cdx2P43241 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm24127-201ENSMUST00000104110 130 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm11372-201ENSMUST00000117348 570 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm10241-201ENSMUST00000117664 286 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm15141-201ENSMUST00000121860 729 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx2P43241 Gm22320-201ENSMUST00000157149 312 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm23960-201ENSMUST00000157206 131 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm27392-201ENSMUST00000185041 101 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm5066-201ENSMUST00000188479 822 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm29598-201ENSMUST00000188996 588 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm7299-201ENSMUST00000194441 581 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.82□□□□□ -1.8
Cdx2P43241 Gm43039-201ENSMUST00000202883 963 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms