Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lire1P11260 Gm5699-201ENSMUST00000152491 723 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm23354-201ENSMUST00000158426 104 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm23205-201ENSMUST00000158671 103 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm25348-201ENSMUST00000158961 111 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.53□□□□□ -1.68
Lire1P11260 Gm29332-201ENSMUST00000190829 227 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm9722-201ENSMUST00000194568 802 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm42451-201ENSMUST00000197410 244 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lire1P11260 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.53□□□□□ -1.68
Lire1P11260 Gm45006-201ENSMUST00000206078 690 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm18855-201ENSMUST00000206689 570 ntBASIC4.53□□□□□ -1.68
Lire1P11260 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.53□□□□□ -1.68
Lire1P11260 Gm18602-201ENSMUST00000209794 851 ntBASIC4.53□□□□□ -1.68
Lire1P11260 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.53□□□□□ -1.68
Lire1P11260 Gm18016-201ENSMUST00000216119 801 ntBASIC4.53□□□□□ -1.68
Lire1P11260 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.53□□□□□ -1.68
Lire1P11260 Gm2645-201ENSMUST00000223516 547 ntBASIC4.53□□□□□ -1.68
Lire1P11260 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Gm23846-201ENSMUST00000083835 107 ntBASIC4.53□□□□□ -1.68
Lire1P11260 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lire1P11260 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lire1P11260 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lire1P11260 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.53□□□□□ -1.68
Lire1P11260 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lire1P11260 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lire1P11260 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
Lire1P11260 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Lire1P11260 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm24096-201ENSMUST00000103905 110 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm12328-201ENSMUST00000118611 197 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm11196-201ENSMUST00000119052 395 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm15603-201ENSMUST00000119252 492 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm8757-201ENSMUST00000119660 372 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm11387-201ENSMUST00000120266 772 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm15791-201ENSMUST00000120365 319 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm13511-201ENSMUST00000121167 363 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm14903-201ENSMUST00000122435 537 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm22277-201ENSMUST00000157204 277 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm22726-201ENSMUST00000158089 179 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Mir1947-201ENSMUST00000158235 85 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm25655-201ENSMUST00000158465 290 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm27492-201ENSMUST00000185194 187 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.52□□□□□ -1.69
Lire1P11260 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lire1P11260 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm10048-201ENSMUST00000194196 372 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm43368-201ENSMUST00000200638 409 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.52□□□□□ -1.69
Lire1P11260 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.52□□□□□ -1.69
Lire1P11260 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lire1P11260 Gm9512-201ENSMUST00000223112 497 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm25260-201ENSMUST00000083053 134 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm26121-201ENSMUST00000083364 162 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Mir215-201ENSMUST00000083628 112 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Gm22826-201ENSMUST00000083774 165 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lire1P11260 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lire1P11260 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.52□□□□□ -1.69
Lire1P11260 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Lire1P11260 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Lire1P11260 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lire1P11260 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lire1P11260 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.52□□□□□ -1.69
Lire1P11260 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lire1P11260 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lire1P11260 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lire1P11260 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 Gm23193-201ENSMUST00000102427 82 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Mir804-201ENSMUST00000103251 95 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lire1P11260 Gm11486-201ENSMUST00000107322 478 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.51□□□□□ -1.69
Lire1P11260 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm14107-201ENSMUST00000117774 330 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm15297-201ENSMUST00000117795 290 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm11708-201ENSMUST00000119530 832 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm11797-201ENSMUST00000121336 754 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm15116-201ENSMUST00000122248 663 ntBASIC4.51□□□□□ -1.69
Lire1P11260 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.51□□□□□ -1.69
Lire1P11260 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Gm25555-201ENSMUST00000158078 111 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 Gm27233-201ENSMUST00000184030 307 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm36986-201ENSMUST00000195320 353 ntBASIC4.51□□□□□ -1.69
Lire1P11260 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lire1P11260 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms