Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm37676-201ENSMUST00000195496 507 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Mir142-201ENSMUST00000198092 64 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm45317-201ENSMUST00000210385 223 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Mir147-201ENSMUST00000102354 79 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm25843-201ENSMUST00000122582 314 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm25150-201ENSMUST00000157121 60 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Mir6996-201ENSMUST00000183922 61 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm37501-201ENSMUST00000192830 691 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm43855-201ENSMUST00000197462 507 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Snord14e-201ENSMUST00000082857 90 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm7381-201ENSMUST00000098958 300 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Chmp6P0C0A3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Chmp6P0C0A3 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.4□□□□□ -1.7
Chmp6P0C0A3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Chmp6P0C0A3 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Chmp6P0C0A3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Chmp6P0C0A3 Mir551b-201ENSMUST00000102165 98 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm15180-201ENSMUST00000117745 492 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm13170-201ENSMUST00000119716 643 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm13865-201ENSMUST00000120957 865 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm5963-201ENSMUST00000143451 236 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm16303-201ENSMUST00000161498 390 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm6245-201ENSMUST00000164699 768 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Mir6899-201ENSMUST00000184798 64 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm28997-201ENSMUST00000188759 429 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Trbv27-201ENSMUST00000193711 277 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm8790-201ENSMUST00000194108 322 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm8774-201ENSMUST00000203621 692 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 Gm31931-201ENSMUST00000219666 222 ntBASIC4.4□□□□□ -1.71
Chmp6P0C0A3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.4□□□□□ -1.71
Chmp6P0C0A3 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms