Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.9□□□□□ -1.63
Col3a1P08121 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col3a1P08121 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.9□□□□□ -1.63
Col3a1P08121 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col3a1P08121 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col3a1P08121 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col3a1P08121 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col3a1P08121 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.89□□□□□ -1.63
Col3a1P08121 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Gm24987-201ENSMUST00000104453 134 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col3a1P08121 Gm12584-201ENSMUST00000117109 1105 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col3a1P08121 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col3a1P08121 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Mir6374-201ENSMUST00000184003 107 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.89□□□□□ -1.63
Col3a1P08121 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 AC126673.2-201ENSMUST00000221052 686 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Gm3086-202ENSMUST00000221248 310 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 CT009733.1-203ENSMUST00000224033 451 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Snora7a-201ENSMUST00000082629 140 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Gm23443-201ENSMUST00000082916 128 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col3a1P08121 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col3a1P08121 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col3a1P08121 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col3a1P08121 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col3a1P08121 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Col3a1P08121 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col3a1P08121 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Col3a1P08121 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col3a1P08121 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.89□□□□□ -1.63
Col3a1P08121 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm12748-201ENSMUST00000120763 504 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm24369-201ENSMUST00000175387 96 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm18026-201ENSMUST00000222789 727 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm5265-201ENSMUST00000076828 342 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm25200-201ENSMUST00000083094 130 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Col3a1P08121 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm25332-201ENSMUST00000158038 105 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm37241-201ENSMUST00000191736 523 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm37603-201ENSMUST00000192368 219 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm43104-201ENSMUST00000197234 311 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Gm34779-201ENSMUST00000210036 263 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.88□□□□□ -1.63
Col3a1P08121 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col3a1P08121 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col3a1P08121 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col3a1P08121 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm4736-201ENSMUST00000100870 380 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm7219-201ENSMUST00000119619 297 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm12897-201ENSMUST00000120341 250 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms